Agents Remember separates four surfaces that are easy to confuse:
agents-remember source checkoutar-coordination runtimeagents-remember/
mcp/
src/agents_remember/
install/
package_data/
runtime/
benchmarks/
docs/
roadmap/
The source checkout packages runtime and benchmark assets as Python package data, alongside the MCP server and public documentation. Agents working on this repository itself follow the root AGENTS.md in the checkout. Users of the runtime normally point their agent at the installed ar-coordination/AGENTS.md.
ar-coordination/
AGENTS.md
providers/
requirements/
patches/
runners/
data/
logs/
skills/
system/
memory-repos/
tasks/
notes/
worktrees/
temp/
The installer copies package-owned assets from agents_remember/package_data/runtime/ into this tree. The MCP settings own the coordination root, so normal users configure that path in the MCP settings JSON rather than through source-checkout environment files.
The installed runtime does not keep a parallel scripts/ execution route; MCP tools and package-local modules own runtime install, provider lifecycle, worktree, memory, and benchmark operations.
This is the repository the agent is actually changing. It may contain internal memory:
my-app/
src/
ar-memory/
When internal memory exists, the c-08-ar-coordination-context-resolver skill resolves it before checking for external memory.
Internal memory is the default. Durable memory lives inside the code repository:
my-app/ar-memory/
onboarding/
docs/
system/
settings.md
settings.json
sources.md
tools.md
The c-00-initialize-memory-repo skill creates this scaffold. The c-03-repo-bootstrap skill bootstraps onboarding content. The c-05-create-or-update-onboarding-files skill maintains file-level onboarding and repo entity catalogs.
External memory stores durable memory in one repo per selected code repository:
ar-coordination/memory-repos/ar-my-app/
memory.md
onboarding/
docs/
system/
Use external memory when teams need a separate memory repository, branch-specific memory movement, or memory review outside the code repository.
The c-08-ar-coordination-context-resolver skill resolves a target repository by checking:
code_repository_root, coordination_root, or task contract<repo>/ar-memory/<coordination-root>/memory-repos/ar-<repo>/If neither supported memory location exists, the c-08-ar-coordination-context-resolver skill fails and asks the caller to initialize memory instead of inventing an empty context.
Once memory is resolved, agents reach into memory and code through three substrates, routed by the c-04-retrieval-strategy-router skill:
The meaning and relationship substrates are served by opt-in providers — GrepAI for semantic memory search, CodeGraphContext for the code graph. They run as local Docker services under ar-coordination/providers/ (shown above) and index code and memory in the background.
These providers are accelerators for finding knowledge; they are not the source of truth. Durable memory stays Markdown + Git, drift-checked and approval-gated, regardless of which substrate surfaced it. runtime_install builds the provider images and provider_watchers drive indexing — see the Providers guide and MCP tool reference.
Runtime install owns package assets under ar-coordination.
The c-00-initialize-memory-repo skill owns memory-root creation or repair.
The c-03-repo-bootstrap skill owns repo onboarding bootstrap and route/slice maintenance.
The c-05-create-or-update-onboarding-files skill owns file-level onboarding and repo entity catalog maintenance.
The c-08-ar-coordination-context-resolver skill owns context resolution facts only.
The c-09-git-worktree-manager skill owns worktree lifecycle, integration, and cleanup.
The c-12-closeout skill owns the closeout approval gate and the code → memory → ledger commit sequence, for both direct edits and worktree-backed tasks.
Provider lifecycle — building images, watchers, and indexing — is owned by the MCP provider tools and runtime_install, not by the memory or workflow skills.